WormBase Tree Display for CDS: PPA25860
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PPA25860 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 168 | |||
330 | 401 | |||||
559 | 587 | |||||
635 | 707 | |||||
754 | 819 | |||||
865 | 924 | |||||
1066 | 1116 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2854-1.75 | ||
DB_remark | contains similarity to Interpro domain IPR026910 (Shisa family) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00115414 | ||||
Corresponding_transcript | PPA25860.1 | |||||
Corresponding_protein | PP64692 | |||||
Corresponding_oligo_set | GPL14372_Probes_53001 | |||||
GPL14372_Probes_53003 | ||||||
Microarray_results | GPL14372_Probes_53001 | |||||
GPL14372_Probes_53003 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 12.0612 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2854-1.75 | Curator_confirmed | WBPerson4055 | |||
Method | curated |