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WormBase Tree Display for CDS: PPA25973

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Name Class

PPA25973SMapS_parentSequencePPA_ChrIV
StructureSource_exons187
214323
398479
580699
8701118
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2854-7.61
DB_remarkcontains similarity to Pfam domain PF00337 (Galactoside-binding lectin); contains similarity to Interpro domains IPR001079 (Galectin, carbohydrate recognition domain), IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00115527
Corresponding_transcriptPPA25973.1
Corresponding_proteinPP58377
Corresponding_oligo_setGPL14372_Probes_52844
GPL14372_Probes_52845
GPL14372_Probes_52846
GPL14372_Probes_52847
Microarray_resultsGPL14372_Probes_52844
GPL14372_Probes_52845
GPL14372_Probes_52846
GPL14372_Probes_52847
RNASeq_FPKMWBls:000003214.502From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001018.56647From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2854-7.61Curator_confirmedWBPerson4055
Methodcurated