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WormBase Tree Display for CDS: PPA26267

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Name Class

PPA26267SMapS_parentSequencePPA_ChrI
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-11.36
DB_remarkPPA-NAS-23.2 protein; contains similarity to Pfam domain PF01400 (Astacin (Peptidase family M12A)); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR035914 (Spermadhesin, CUB domain superfamily), IPR001506 (Peptidase M12A), IPR006026 (Peptidase, metallopeptidase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00115821
Corresponding_transcriptPPA26267.1
Corresponding_proteinPP73766
Corresponding_oligo_setGPL14372_Probes_17800
GPL14372_Probes_17801
GPL14372_Probes_17802
GPL14372_Probes_17803
Microarray_resultsGPL14372_Probes_17800
GPL14372_Probes_17801
GPL14372_Probes_17802
GPL14372_Probes_17803
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-11.36Curator_confirmedWBPerson4055
Methodcurated