WormBase Tree Display for CDS: PPA26271

PPA26271 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (20)
  DB_info: Database: pristionchus.org cds gene-UMM-S57-11.54
    DB_remark: contains similarity to Pfam domain PF01421 (Reprolysin (M12B) family zinc metalloprotease); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR036436 (Disintegrin domain superfamily), IPR001590 (Peptidase M12B, ADAM/reprolysin)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
    Start_not_found: 1
  Visible: Gene: WBGene00115825
    Corresponding_transcript: PPA26271.1
    Corresponding_protein: PP54160
    Corresponding_oligo_set: GPL14372_Probes_17795
      GPL14372_Probes_17796
      GPL14372_Probes_17797
      GPL14372_Probes_17798
      GPL14372_Probes_17799
      GPL14372_Probes_68578
    Microarray_results: GPL14372_Probes_17795
      GPL14372_Probes_17796
      GPL14372_Probes_17797
      GPL14372_Probes_17798
      GPL14372_Probes_17799
      GPL14372_Probes_68578
    RNASeq_FPKM: WBls:0000032 1.9956 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 7.07052 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S57-11.54 Curator_confirmed: WBPerson4055
  Method: curated