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WormBase Tree Display for CDS: PPA26292

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Name Class

PPA26292SMapS_parentSequencePPA_ChrI
StructureSource_exons (12)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-12.70
TREEFAMTREEFAM_IDTF315373
DB_remarkPPA-NHR-39 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00115846
Corresponding_transcriptPPA26292.1
Corresponding_proteinPP59089
Corresponding_oligo_setGPL14372_Probes_68539
GPL14372_Probes_68540
GPL14372_Probes_68541
GPL14372_Probes_68542
GPL14372_Probes_68543
GPL14372_Probes_68544
Microarray_resultsGPL14372_Probes_68539
GPL14372_Probes_68540
GPL14372_Probes_68541
GPL14372_Probes_68542
GPL14372_Probes_68543
GPL14372_Probes_68544
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.82453From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-12.70Curator_confirmedWBPerson4055
Methodcurated