WormBase Tree Display for CDS: PPA26317
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PPA26317 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-13.9 | ||
DB_remark | PPA-FUT-6 protein; contains similarity to Pfam domains PF00852 (Glycosyltransferase family 10 (fucosyltransferase) C-term), PF17039 (Fucosyltransferase, N-terminal); contains similarity to Interpro domains IPR038577 (GT10-like, C-terminal domain superfamily), IPR001503 (Glycosyl transferase family 10), IPR031481 (Fucosyltransferase, N-terminal) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00115871 | ||||
Corresponding_transcript | PPA26317.1 | |||||
Corresponding_protein | PP69702 | |||||
Corresponding_oligo_set | GPL14372_Probes_68471 | |||||
GPL14372_Probes_68472 | ||||||
GPL14372_Probes_68473 | ||||||
GPL14372_Probes_68474 | ||||||
Microarray_results | GPL14372_Probes_68471 | |||||
GPL14372_Probes_68472 | ||||||
GPL14372_Probes_68473 | ||||||
GPL14372_Probes_68474 | ||||||
RNASeq_FPKM | WBls:0000032 | 3.00323 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S57-13.9 | Curator_confirmed | WBPerson4055 | |||
Method | curated |