WormBase Tree Display for CDS: PPA26328
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PPA26328 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-14.13 | ||
TREEFAM | TREEFAM_ID | TF319889 | ||||
DB_remark | contains similarity to Pfam domain PF00753 (Metallo-beta-lactamase superfamily); contains similarity to Interpro domains IPR036866 (Ribonuclease Z/Hydroxyacylglutathione hydrolase-like), IPR001279 (Metallo-beta-lactamase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00115882 | ||||
Corresponding_transcript | PPA26328.1 | |||||
Corresponding_protein | PP74074 | |||||
Corresponding_oligo_set | GPL14372_Probes_68459 | |||||
Microarray_results | GPL14372_Probes_68459 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S57-14.13 | Curator_confirmed | WBPerson4055 | |||
Method | curated |