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WormBase Tree Display for CDS: PPA26345

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Name Class

PPA26345SMapS_parentSequencePPA_ChrI
StructureSource_exons177
257347
394476
754871
9741081
11241204
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-15.14
TREEFAMTREEFAM_IDTF315123
DB_remarkcontains similarity to Pfam domains PF01472 (PUA domain), PF17832 (Pre-PUA-like domain); contains similarity to Interpro domains IPR036974 (PUA domain superfamily), IPR004521 (Uncharacterised domain CHP00451), IPR015947 (PUA-like superfamily), IPR002478 (PUA domain), IPR016437 (MCT-1/Tma20), IPR041366 (Pre-PUA domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00115899
Corresponding_transcriptPPA26345.1
Corresponding_proteinPP73833
Corresponding_oligo_setGPL14372_Probes_68430
GPL14372_Probes_68431
GPL14372_Probes_68432
GPL14372_Probes_68433
GPL14372_Probes_68434
Matching_cDNAFG098691Inferred_automaticallytranscript_builder.pl
FG099233Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_68430
GPL14372_Probes_68431
GPL14372_Probes_68432
GPL14372_Probes_68433
GPL14372_Probes_68434
RNASeq_FPKMWBls:000003274.7278From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010188.2823From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-15.14Curator_confirmedWBPerson4055
Methodcurated