WormBase Tree Display for CDS: PPA26351
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PPA26351 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons | 1 | 83 | |||
450 | 563 | |||||
821 | 895 | |||||
980 | 1073 | |||||
1443 | 1532 | |||||
2562 | 2651 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-15.21 | ||
DB_remark | contains similarity to Pfam domain PF00053 (Laminin EGF domain); contains similarity to Interpro domain IPR002049 (Laminin-type EGF domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00115905 | ||||
Corresponding_transcript | PPA26351.1 | |||||
Corresponding_protein | PP75556 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Nov 2019 14:48:40 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S57-15.21 | Curator_confirmed | WBPerson4055 | |||
[191108 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |