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WormBase Tree Display for CDS: PPA26423

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Name Class

PPA26423SMapS_parentSequencePPA_ChrI
StructureSource_exons (29)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S7-48.5
DB_remarkcontains similarity to Pfam domain PF00755 (Choline/Carnitine o-acyltransferase); contains similarity to Interpro domains IPR000542 (Acyltransferase ChoActase/COT/CPT), IPR039551 (Choline/carnitine acyltransferase domain), IPR042232 (), IPR042231 (Choline/Carnitine o-acyltransferase, domain 2)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00115977
Corresponding_transcriptPPA26423.1
Corresponding_proteinPP55113
Corresponding_oligo_setGPL14372_Probes_1056
GPL14372_Probes_1057
GPL14372_Probes_1058
GPL14372_Probes_1059
GPL14372_Probes_35444
GPL14372_Probes_35446
GPL14372_Probes_35447
GPL14372_Probes_36343
GPL14372_Probes_36345
GPL14372_Probes_36347
Matching_cDNAFE935203Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_1056
GPL14372_Probes_1057
GPL14372_Probes_1058
GPL14372_Probes_1059
GPL14372_Probes_35444
GPL14372_Probes_35446
GPL14372_Probes_35447
GPL14372_Probes_36343
GPL14372_Probes_36345
GPL14372_Probes_36347
RNASeq_FPKMWBls:000003225.1865From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.5239From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S7-48.5Curator_confirmedWBPerson4055
Methodcurated