WormBase Tree Display for CDS: PPA26508
expand all nodes | collapse all nodes | view schema
PPA26508 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S7-44.29 | ||
TREEFAM | TREEFAM_ID | TF314942 | ||||
DB_remark | contains similarity to Interpro domains IPR036514 (SGNH hydrolase superfamily), IPR038885 (Phospholipase B1, membrane-associated) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116062 | ||||
Corresponding_transcript | PPA26508.1 | |||||
Corresponding_protein | PP52451 | |||||
Corresponding_oligo_set | GPL14372_Probes_36218 | |||||
GPL14372_Probes_36219 | ||||||
GPL14372_Probes_36220 | ||||||
Microarray_results | GPL14372_Probes_36218 | |||||
GPL14372_Probes_36219 | ||||||
GPL14372_Probes_36220 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.57703 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S7-44.29 | Curator_confirmed | WBPerson4055 | |||
Method | curated |