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WormBase Tree Display for CDS: PPA26510

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Name Class

PPA26510EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons157
127209
333396
589645
774881
15511637
DB_infoDatabasepristionchus.orgcdsgene-UMS-S7-44.12
DB_remarkPPA-PQN-68 protein; contains similarity to Pfam domain PF02580 (D-Tyr-tRNA(Tyr) deacylase); contains similarity to Interpro domains IPR023509 (D-aminoacyl-tRNA deacylase-like superfamily), IPR003732 (D-aminoacyl-tRNA deacylase DTD)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00116064
Corresponding_transcriptPPA26510.1
Corresponding_proteinPP14771
Corresponding_oligo_setGPL14372_Probes_35422
GPL14372_Probes_35424
Matching_cDNABQ087803Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_35422
GPL14372_Probes_35424
RNASeq_FPKMWBls:000003214.1525From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.7198From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed21 Aug 2019 11:52:04WBPerson4055
Remark[171116 mh6] renamed from gene-UMS-S7-44.12Curator_confirmedWBPerson4055
[190821 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated