WormBase Tree Display for CDS: PPA26538
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PPA26538 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 86 | |||
226 | 265 | |||||
339 | 402 | |||||
463 | 524 | |||||
585 | 655 | |||||
729 | 777 | |||||
865 | 951 | |||||
1144 | 1257 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-43.59 | ||
DB_remark | contains similarity to Pfam domain PF04970 (Lecithin retinol acyltransferase); contains similarity to Interpro domain IPR007053 (LRAT domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116092 | ||||
Corresponding_transcript | PPA26538.1 | |||||
Corresponding_protein | PP57100 | |||||
Corresponding_oligo_set | GPL14372_Probes_36200 | |||||
GPL14372_Probes_36201 | ||||||
Microarray_results | GPL14372_Probes_36200 | |||||
GPL14372_Probes_36201 | ||||||
RNASeq_FPKM | WBls:0000032 | 43.5956 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 92.7175 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-43.59 | Curator_confirmed | WBPerson4055 | |||
Method | curated |