WormBase Tree Display for CDS: PPA26636
expand all nodes | collapse all nodes | view schema
PPA26636 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 50 | |||
588 | 665 | |||||
762 | 831 | |||||
1073 | 1155 | |||||
1635 | 1695 | |||||
1979 | 2038 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-37.42 | ||
DB_remark | PPA-INX-11.1 protein; contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domains IPR031123 (), IPR000990 (Innexin) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116190 | ||||
Corresponding_transcript | PPA26636.1 | |||||
Corresponding_protein | PP61198 | |||||
Corresponding_oligo_set | GPL14372_Probes_766 | |||||
GPL14372_Probes_767 | ||||||
GPL14372_Probes_769 | ||||||
Microarray_results | GPL14372_Probes_766 | |||||
GPL14372_Probes_767 | ||||||
GPL14372_Probes_769 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-37.42 | Curator_confirmed | WBPerson4055 | |||
Method | curated |