WormBase Tree Display for CDS: PPA26707
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PPA26707 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 6 | |||
402 | 527 | |||||
950 | 1054 | |||||
1176 | 1292 | |||||
1393 | 1503 | |||||
2326 | 2391 | |||||
2434 | 2512 | |||||
2579 | 2678 | |||||
2817 | 2898 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-34.29 | ||
DB_remark | contains similarity to Pfam domain PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh); contains similarity to Interpro domain IPR019422 (7TM GPCR, serpentine receptor class h (Srh)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116261 | ||||
Corresponding_transcript | PPA26707.1 | |||||
Corresponding_protein | PP56109 | |||||
Corresponding_oligo_set | GPL14372_Probes_652 | |||||
GPL14372_Probes_653 | ||||||
GPL14372_Probes_654 | ||||||
GPL14372_Probes_655 | ||||||
GPL14372_Probes_656 | ||||||
Microarray_results | GPL14372_Probes_652 | |||||
GPL14372_Probes_653 | ||||||
GPL14372_Probes_654 | ||||||
GPL14372_Probes_655 | ||||||
GPL14372_Probes_656 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-34.29 | Curator_confirmed | WBPerson4055 | |||
Method | curated |