WormBase Tree Display for CDS: PPA26709
expand all nodes | collapse all nodes | view schema
PPA26709 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 37 | |||
106 | 191 | |||||
382 | 437 | |||||
507 | 562 | |||||
619 | 686 | |||||
1091 | 1225 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-33.38 | ||
DB_remark | contains similarity to Pfam domain PF01477 (PLAT/LH2 domain); contains similarity to Interpro domains IPR001024 (PLAT/LH2 domain), IPR036392 (PLAT/LH2 domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116263 | ||||
Corresponding_transcript | PPA26709.1 | |||||
Corresponding_protein | PP66175 | |||||
Corresponding_oligo_set | GPL14372_Probes_36053 | |||||
GPL14372_Probes_36054 | ||||||
GPL14372_Probes_36055 | ||||||
GPL14372_Probes_36056 | ||||||
Microarray_results | GPL14372_Probes_36053 | |||||
GPL14372_Probes_36054 | ||||||
GPL14372_Probes_36055 | ||||||
GPL14372_Probes_36056 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-33.38 | Curator_confirmed | WBPerson4055 | |||
Method | curated |