WormBase Tree Display for CDS: PPA26710
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PPA26710 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (15) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-33.19 | ||
DB_remark | contains similarity to Pfam domain PF00650 (CRAL/TRIO domain); contains similarity to Interpro domains IPR001251 (CRAL-TRIO lipid binding domain), IPR036598 (GOLD domain superfamily), IPR036273 (CRAL/TRIO, N-terminal domain superfamily), IPR036865 (CRAL-TRIO lipid binding domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116264 | ||||
Corresponding_transcript | PPA26710.1 | |||||
Corresponding_protein | PP52963 | |||||
Corresponding_oligo_set | GPL14372_Probes_36046 | |||||
GPL14372_Probes_36047 | ||||||
GPL14372_Probes_36048 | ||||||
GPL14372_Probes_36049 | ||||||
GPL14372_Probes_36050 | ||||||
GPL14372_Probes_36051 | ||||||
GPL14372_Probes_36052 | ||||||
Microarray_results | GPL14372_Probes_36046 | |||||
GPL14372_Probes_36047 | ||||||
GPL14372_Probes_36048 | ||||||
GPL14372_Probes_36049 | ||||||
GPL14372_Probes_36050 | ||||||
GPL14372_Probes_36051 | ||||||
GPL14372_Probes_36052 | ||||||
RNASeq_FPKM | WBls:0000032 | 16.5896 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 7.8377 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-33.19 | Curator_confirmed | WBPerson4055 | |||
Method | curated |