WormBase Tree Display for CDS: PPA26951
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PPA26951 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 35 | |||
55 | 135 | |||||
234 | 383 | |||||
526 | 604 | |||||
920 | 974 | |||||
1102 | 1229 | |||||
1314 | 1399 | |||||
3027 | 3099 | |||||
3225 | 3323 | |||||
3713 | 3757 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-50.43 | ||
DB_remark | contains similarity to Pfam domain PF03045 (DAN domain); contains similarity to Interpro domains IPR006207 (Cystine knot, C-terminal), IPR029034 (Cystine-knot cytokine), IPR004133 (DAN) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116505 | ||||
Corresponding_transcript | PPA26951.1 | |||||
Corresponding_protein | PP68146 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-50.43 | Curator_confirmed | WBPerson4055 | |||
Method | curated |