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WormBase Tree Display for CDS: PPA27014

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Name Class

PPA27014SMapS_parentSequencePPA_ChrIV
StructureSource_exons196
500547
644811
8891013
10911203
13051411
14671535
16631764
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2840-8.40
DB_remarkcontains similarity to Pfam domain PF00104 (Ligand-binding domain of nuclear hormone receptor); contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00116568
Corresponding_transcriptPPA27014.1
Corresponding_proteinPP52109
Corresponding_oligo_setGPL14372_Probes_26733
GPL14372_Probes_26734
GPL14372_Probes_26735
GPL14372_Probes_26736
GPL14372_Probes_26737
Microarray_resultsGPL14372_Probes_26733
GPL14372_Probes_26734
GPL14372_Probes_26735
GPL14372_Probes_26736
GPL14372_Probes_26737
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2840-8.40Curator_confirmedWBPerson4055
Methodcurated