WormBase Tree Display for CDS: PPA27254a
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PPA27254a | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (37) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-18.11 | ||
DB_remark | contains similarity to Pfam domain PF13912 (C2H2-type zinc finger); contains similarity to Interpro domain IPR013087 (Zinc finger C2H2-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Isoform | Curator_confirmed | WBPerson4055 | ||||
Visible | Gene | WBGene00116808 | ||||
Corresponding_transcript | PPA27254a.1 | |||||
Corresponding_protein | PP75482 | |||||
Corresponding_oligo_set | GPL14372_Probes_72645 | |||||
GPL14372_Probes_72647 | ||||||
Microarray_results | GPL14372_Probes_72645 | |||||
GPL14372_Probes_72647 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 1.27523 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Nov 2019 11:09:32 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S207-18.11 | Curator_confirmed | WBPerson4055 | |||
[191108 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |