WormBase Tree Display for CDS: PPA27273
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PPA27273 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 91 | |||
253 | 380 | |||||
626 | 697 | |||||
741 | 814 | |||||
969 | 1125 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-19.51 | ||
TREEFAM | TREEFAM_ID | TF324605 | ||||
DB_remark | PPA-MTP-18 protein; contains similarity to Pfam domain PF10558 (Mitochondrial 18 KDa protein (MTP18)); contains similarity to Interpro domain IPR019560 (Mitochondrial 18kDa protein) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116827 | ||||
Corresponding_transcript | PPA27273.1 | |||||
Corresponding_protein | PP57595 | |||||
Corresponding_oligo_set | GPL14372_Probes_72567 | |||||
GPL14372_Probes_72568 | ||||||
Microarray_results | GPL14372_Probes_72567 | |||||
GPL14372_Probes_72568 | ||||||
RNASeq_FPKM | WBls:0000032 | 10.1113 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 83.6352 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-19.51 | Curator_confirmed | WBPerson4055 | |||
Method | curated |