Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA27313

expand all nodes | collapse all nodes | view schema

Name Class

PPA27313EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-21.61
TREEFAMTREEFAM_IDTF314032
DB_remarkPPA-AAK-2 protein; contains similarity to Pfam domains PF00069 (Protein kinase domain), PF16579 (Adenylate sensor of SNF1-like protein kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR032270 (AMPK, C-terminal adenylate sensor domain), IPR028375 (KA1 domain/Ssp2, C-terminal), IPR000719 (Protein kinase domain)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00116867
Corresponding_transcriptPPA27313.1
Corresponding_proteinPP75164
Corresponding_oligo_setGPL14372_Probes_72449
Microarray_resultsGPL14372_Probes_72449
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.37445From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed21 Aug 2019 11:59:21WBPerson4055
Remark[171116 mh6] renamed from gene-UMM-S207-21.61Curator_confirmedWBPerson4055
[190821 mh6] This gene has been split based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated