WormBase Tree Display for CDS: PPA27313
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PPA27313 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-21.61 | ||
TREEFAM | TREEFAM_ID | TF314032 | ||||
DB_remark | PPA-AAK-2 protein; contains similarity to Pfam domains PF00069 (Protein kinase domain), PF16579 (Adenylate sensor of SNF1-like protein kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR032270 (AMPK, C-terminal adenylate sensor domain), IPR028375 (KA1 domain/Ssp2, C-terminal), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116867 | ||||
Corresponding_transcript | PPA27313.1 | |||||
Corresponding_protein | PP75164 | |||||
Corresponding_oligo_set | GPL14372_Probes_72449 | |||||
Microarray_results | GPL14372_Probes_72449 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.37445 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 21 Aug 2019 11:59:21 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S207-21.61 | Curator_confirmed | WBPerson4055 | |||
[190821 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |