WormBase Tree Display for CDS: PPA27350
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PPA27350 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 93 | |||
216 | 301 | |||||
363 | 429 | |||||
473 | 544 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S207-22.55 | ||
DB_remark | contains similarity to Pfam domain PF00431 (CUB domain); contains similarity to Interpro domains IPR000859 (CUB domain), IPR035914 (Spermadhesin, CUB domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00116904 | ||||
Corresponding_transcript | PPA27350.1 | |||||
Corresponding_protein | PP11881 | |||||
Corresponding_oligo_set | GPL14372_Probes_20382 | |||||
GPL14372_Probes_20383 | ||||||
GPL14372_Probes_20384 | ||||||
Microarray_results | GPL14372_Probes_20382 | |||||
GPL14372_Probes_20383 | ||||||
GPL14372_Probes_20384 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S207-22.55 | Curator_confirmed | WBPerson4055 | |||
Method | curated |