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WormBase Tree Display for CDS: PPA27426

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Name Class

PPA27426SMapS_parentSequencePPA_ChrIV
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2840-100.41
DB_remarkcontains similarity to Pfam domain PF00001 (7 transmembrane receptor (rhodopsin family)); contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like, 7TM), IPR000276 (G protein-coupled receptor, rhodopsin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00116980
Corresponding_transcriptPPA27426.1
Corresponding_proteinPP72111
Corresponding_oligo_setGPL14372_Probes_86624
GPL14372_Probes_86625
GPL14372_Probes_86627
GPL14372_Probes_86628
Microarray_resultsGPL14372_Probes_86624
GPL14372_Probes_86625
GPL14372_Probes_86627
GPL14372_Probes_86628
RNASeq_FPKMWBls:00000329.86613From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2840-100.41Curator_confirmedWBPerson4055
Methodcurated