WormBase Tree Display for CDS: PPA27980
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PPA27980 | SMap | S_parent | Sequence | PPA_ChrX | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 51 | |||
414 | 470 | |||||
560 | 646 | |||||
840 | 910 | |||||
1163 | 1238 | |||||
7895 | 7945 | |||||
8123 | 8203 | |||||
8408 | 8468 | |||||
8695 | 8807 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2861-1.17 | ||
DB_remark | contains similarity to Pfam domain PF00644 (Poly(ADP-ribose) polymerase catalytic domain); contains similarity to Interpro domain IPR012317 (Poly(ADP-ribose) polymerase, catalytic domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
End_not_found | ||||||
Visible | Gene | WBGene00117534 | ||||
Corresponding_transcript | PPA27980.1 | |||||
Corresponding_protein | PP62796 | |||||
Corresponding_oligo_set | GPL14372_Probes_3190 | |||||
GPL14372_Probes_3192 | ||||||
GPL14372_Probes_3193 | ||||||
Microarray_results | GPL14372_Probes_3190 | |||||
GPL14372_Probes_3192 | ||||||
GPL14372_Probes_3193 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2861-1.17 | Curator_confirmed | WBPerson4055 | |||
Method | curated |