WormBase Tree Display for CDS: PPA28029
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PPA28029 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (15) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S10-69.39 | ||
TREEFAM | TREEFAM_ID | TF354296 | ||||
DB_remark | PPA-SPHK-1 protein; contains similarity to Pfam domain PF00781 (Diacylglycerol kinase catalytic domain); contains similarity to Interpro domains IPR017438 (Inorganic polyphosphate/ATP-NAD kinase, N-terminal), IPR001206 (Diacylglycerol kinase, catalytic domain), IPR016064 (NAD kinase/diacylglycerol kinase-like domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00117583 | ||||
Corresponding_transcript | PPA28029.1 | |||||
Corresponding_protein | PP73424 | |||||
Corresponding_oligo_set | GPL14372_Probes_58592 | |||||
GPL14372_Probes_58593 | ||||||
GPL14372_Probes_58594 | ||||||
GPL14372_Probes_58595 | ||||||
Microarray_results | GPL14372_Probes_58592 | |||||
GPL14372_Probes_58593 | ||||||
GPL14372_Probes_58594 | ||||||
GPL14372_Probes_58595 | ||||||
RNASeq_FPKM | WBls:0000032 | 34.3781 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 47.9866 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S10-69.39 | Curator_confirmed | WBPerson4055 | |||
Method | curated |