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WormBase Tree Display for CDS: PPA28029

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Name Class

PPA28029SMapS_parentSequencePPA_ChrII
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S10-69.39
TREEFAMTREEFAM_IDTF354296
DB_remarkPPA-SPHK-1 protein; contains similarity to Pfam domain PF00781 (Diacylglycerol kinase catalytic domain); contains similarity to Interpro domains IPR017438 (Inorganic polyphosphate/ATP-NAD kinase, N-terminal), IPR001206 (Diacylglycerol kinase, catalytic domain), IPR016064 (NAD kinase/diacylglycerol kinase-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00117583
Corresponding_transcriptPPA28029.1
Corresponding_proteinPP73424
Corresponding_oligo_setGPL14372_Probes_58592
GPL14372_Probes_58593
GPL14372_Probes_58594
GPL14372_Probes_58595
Microarray_resultsGPL14372_Probes_58592
GPL14372_Probes_58593
GPL14372_Probes_58594
GPL14372_Probes_58595
RNASeq_FPKMWBls:000003234.3781From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010147.9866From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S10-69.39Curator_confirmedWBPerson4055
Methodcurated