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WormBase Tree Display for CDS: PPA28057

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Name Class

PPA28057SMapS_parentSequencePPA_ChrII
StructureSource_exons (60)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-70.35
DB_remarkPPA-RHGF-2 protein; contains similarity to Pfam domains PF00621 (RhoGEF domain), PF02196 (Raf-like Ras-binding domain), PF03407 (Nucleotide-diphospho-sugar transferase); contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR035899 (Dbl homology (DH) domain superfamily), IPR003116 (Raf-like Ras-binding), IPR011993 (PH-like domain superfamily), IPR005069 (Nucleotide-diphospho-sugar transferase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00117611
Corresponding_transcriptPPA28057.1
Corresponding_proteinPP53040
Corresponding_oligo_set (11)
Microarray_results (11)
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-70.35Curator_confirmedWBPerson4055
Methodcurated