WormBase Tree Display for CDS: PPA28057
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PPA28057 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (60) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-70.35 | ||
DB_remark | PPA-RHGF-2 protein; contains similarity to Pfam domains PF00621 (RhoGEF domain), PF02196 (Raf-like Ras-binding domain), PF03407 (Nucleotide-diphospho-sugar transferase); contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR035899 (Dbl homology (DH) domain superfamily), IPR003116 (Raf-like Ras-binding), IPR011993 (PH-like domain superfamily), IPR005069 (Nucleotide-diphospho-sugar transferase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00117611 | ||||
Corresponding_transcript | PPA28057.1 | |||||
Corresponding_protein | PP53040 | |||||
Corresponding_oligo_set (11) | ||||||
Microarray_results (11) | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-70.35 | Curator_confirmed | WBPerson4055 | |||
Method | curated |