WormBase Tree Display for CDS: PPA28112
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| PPA28112 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (34) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S10-71.17 | ||
| DB_remark | PPA-IFG-1 protein; contains similarity to Pfam domain PF02854 (MIF4G domain); contains similarity to Interpro domains IPR016021 (), IPR003890 (MIF4G-like, type 3), IPR016024 (Armadillo-type fold) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00117666 | ||||
| Corresponding_transcript | PPA28112.1 | |||||
| Corresponding_protein | PP51206 | |||||
| Corresponding_oligo_set (13) | ||||||
| Microarray_results (13) | ||||||
| RNASeq_FPKM | WBls:0000032 | 27.7299 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 19.471 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S10-71.17 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
