WormBase Tree Display for CDS: PPA28118
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PPA28118 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (14) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-72.0 | ||
TREEFAM | TREEFAM_ID | TF316724 | ||||
DB_remark | PPA-DAB-1 protein; contains similarity to Pfam domain PF00640 (Phosphotyrosine interaction domain (PTB/PID)); contains similarity to Interpro domains IPR028761 (), IPR011993 (PH-like domain superfamily), IPR006020 (PTB/PI domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00117672 | ||||
Corresponding_transcript | PPA28118.1 | |||||
Corresponding_protein | PP57477 | |||||
Corresponding_oligo_set | GPL14372_Probes_12456 | |||||
GPL14372_Probes_12457 | ||||||
GPL14372_Probes_12458 | ||||||
GPL14372_Probes_12459 | ||||||
GPL14372_Probes_12460 | ||||||
Microarray_results | GPL14372_Probes_12456 | |||||
GPL14372_Probes_12457 | ||||||
GPL14372_Probes_12458 | ||||||
GPL14372_Probes_12459 | ||||||
GPL14372_Probes_12460 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-72.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |