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WormBase Tree Display for CDS: PPA28187

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Name Class

PPA28187SMapS_parentSequencePPA_ChrII
StructureSource_exons148
102164
217277
23632457
25062556
28562952
30013038
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-75.4
DB_remarkPPA-CAL-8 protein; contains similarity to Pfam domain PF13499 (EF-hand domain pair); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR011992 (EF-hand domain pair)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00117741
Corresponding_transcriptPPA28187.1
Corresponding_proteinPP66078
Corresponding_oligo_setGPL14372_Probes_12521
GPL14372_Probes_12522
Microarray_resultsGPL14372_Probes_12521
GPL14372_Probes_12522
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-75.4Curator_confirmedWBPerson4055
Methodcurated