Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA28256

expand all nodes | collapse all nodes | view schema

Name Class

PPA28256SMapS_parentSequencePPA_ChrII
StructureSource_exons (29)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-79.54
DB_remarkcontains similarity to Pfam domain PF12348 (CLASP N terminal); contains similarity to Interpro domains IPR034085 (TOG domain), IPR024395 (CLASP N-terminal domain), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00117810
Corresponding_transcriptPPA28256.1
Corresponding_proteinPP19264
Corresponding_oligo_setGPL14372_Probes_59076
GPL14372_Probes_59077
GPL14372_Probes_59079
Matching_cDNAAW114642Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_59076
GPL14372_Probes_59077
GPL14372_Probes_59079
RNASeq_FPKMWBls:000003230.3763From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010122.0756From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-79.54Curator_confirmedWBPerson4055
Methodcurated