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WormBase Tree Display for CDS: PPA28348

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Name Class

PPA28348SMapS_parentSequencePPA_ChrII
StructureSource_exons158
9011025
12171291
14551528
15801685
29713108
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-83.47
DB_remarkcontains similarity to Pfam domain PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR006176 (3-hydroxyacyl-CoA dehydrogenase, NAD binding)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00117902
Corresponding_transcriptPPA28348.1
Corresponding_proteinPP63575
Corresponding_oligo_setGPL14372_Probes_59343
GPL14372_Probes_59345
GPL14372_Probes_59346
GPL14372_Probes_59347
Microarray_resultsGPL14372_Probes_59343
GPL14372_Probes_59345
GPL14372_Probes_59346
GPL14372_Probes_59347
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010191.9722From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-83.47Curator_confirmedWBPerson4055
Methodcurated