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WormBase Tree Display for CDS: PPA28603

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Name Class

PPA28603SMapS_parentSequencePPA_ChrI
StructureSource_exons (54)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-1.74
DB_remarkcontains similarity to Pfam domain PF12432 (Protein of unknown function (DUF3677)); contains similarity to Interpro domains IPR038902 (Integrator complex subunit 1), IPR016024 (Armadillo-type fold), IPR022145 (Integrator complex subunit 1, RPB2-binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00118157
Corresponding_transcriptPPA28603.1
Corresponding_proteinPP73616
Corresponding_oligo_set (14)
Matching_cDNACN657989Inferred_automaticallytranscript_builder.pl
Microarray_results (14)
RNASeq_FPKMWBls:000003210.8811From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001019.6371From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-1.74Curator_confirmedWBPerson4055
Methodcurated