WormBase Tree Display for CDS: PPA28621

PPA28621 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (34)
  DB_info: Database: pristionchus.org cds gene-UMM-S57-1.0
    DB_remark: contains similarity to Pfam domains PF01400 (Astacin (Peptidase family M12A)), PF01757 (Acyltransferase family); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR002656 (Acyltransferase 3 domain), IPR001506 (Peptidase M12A), IPR006026 (Peptidase, metallopeptidase)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00118175
    Corresponding_transcript: PPA28621.1
    Corresponding_protein: PP53029
    Corresponding_oligo_set: GPL14372_Probes_78468
      GPL14372_Probes_78469
      GPL14372_Probes_78470
      GPL14372_Probes_78471
      GPL14372_Probes_78472
      GPL14372_Probes_78473
    Microarray_results: GPL14372_Probes_78468
      GPL14372_Probes_78469
      GPL14372_Probes_78470
      GPL14372_Probes_78471
      GPL14372_Probes_78472
      GPL14372_Probes_78473
    RNASeq_FPKM: WBls:0000032 4.82132 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S57-1.0 Curator_confirmed: WBPerson4055
  Method: curated