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WormBase Tree Display for CDS: PPA28652

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Name Class

PPA28652SMapS_parentSequencePPA_ChrI
StructureSource_exons (29)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-0.53
TREEFAMTREEFAM_IDTF300866
DB_remarkPPA-SYF-1 protein; contains similarity to Interpro domains IPR003107 (HAT (Half-A-TPR) repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00118206
Corresponding_transcriptPPA28652.1
Corresponding_proteinPP64829
Corresponding_oligo_set (14)
Matching_cDNAFE934374Inferred_automaticallytranscript_builder.pl
AA191971Inferred_automaticallytranscript_builder.pl
Microarray_results (14)
RNASeq_FPKMWBls:000003232.1969From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010149.289From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-0.53Curator_confirmedWBPerson4055
Methodcurated