WormBase Tree Display for CDS: PPA28706

PPA28706 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 159
      264 384
      432 508
      1818 1921
      1988 2349
      2455 2578
      2681 2765
  DB_info: Database: pristionchus.org cds gene-UMM-S207-3.5
    DB_remark: PPA-DPY-8 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00118260
    Corresponding_transcript: PPA28706.1
    Corresponding_protein: PP24933
    Corresponding_oligo_set: GPL14372_Probes_78169
      GPL14372_Probes_78170
      GPL14372_Probes_78171
      GPL14372_Probes_78172
    Microarray_results: GPL14372_Probes_78169
      GPL14372_Probes_78170
      GPL14372_Probes_78171
      GPL14372_Probes_78172
    RNASeq_FPKM: WBls:0000032 46.7275 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 13.7982 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S207-3.5 Curator_confirmed: WBPerson4055
  Method: curated