WormBase Tree Display for CDS: PPA28710

PPA28710 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 46
      100 191
      250 366
      410 515
      561 694
      737 823
      874 975
      1019 1102
      1159 1284
  DB_info: Database: pristionchus.org cds gene-UMM-S207-3.22
    DB_remark: PPA-CEH-18 protein; contains similarity to Pfam domains PF00046 (Homeodomain), PF00157 (Pou domain - N-terminal to homeobox domain); contains similarity to Interpro domains IPR013847 (POU domain), IPR000327 (POU-specific domain), IPR001356 (Homeobox domain), IPR010982 (Lambda repressor-like, DNA-binding domain superfamily), IPR009057 (Homeobox-like domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00118264
    Corresponding_transcript: PPA28710.1
    Corresponding_protein: PP69215
    Corresponding_oligo_set: GPL14372_Probes_78133
      GPL14372_Probes_78134
      GPL14372_Probes_78135
      GPL14372_Probes_78137
    Microarray_results: GPL14372_Probes_78133
      GPL14372_Probes_78134
      GPL14372_Probes_78135
      GPL14372_Probes_78137
    RNASeq_FPKM: WBls:0000032 14.0135 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.51767 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S207-3.22 Curator_confirmed: WBPerson4055
  Method: curated