WormBase Tree Display for CDS: PPA28723
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PPA28723 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (18) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-3.14 | ||
DB_remark | PPA-CLC-5 protein; contains similarity to Pfam domain PF07062 (Clc-like); contains similarity to Interpro domain IPR010761 (Clc protein-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00118277 | ||||
Corresponding_transcript | PPA28723.1 | |||||
Corresponding_protein | PP52619 | |||||
Matching_cDNA | FG103738 | Inferred_automatically | transcript_builder.pl | |||
EB183508 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000032 | 2.19051 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 7.76116 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-3.14 | Curator_confirmed | WBPerson4055 | |||
Method | curated |