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WormBase Tree Display for CDS: PPA28744

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Name Class

PPA28744SMapS_parentSequencePPA_ChrI
StructureSource_exons (34)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-4.5
DB_remarkPPA-UNC-2 protein; contains similarity to Pfam domains PF00520 (Ion transport protein), PF08763 (Voltage gated calcium channel IQ domain), PF16905 (Voltage-dependent L-type calcium channel, IQ-associated); contains similarity to Interpro domains IPR014873 (Voltage-dependent calcium channel, alpha-1 subunit, IQ domain), IPR031649 (Voltage-dependent L-type calcium channel, IQ-associated domain), IPR005821 (Ion transport domain), IPR005447 (Voltage-dependent calcium channel, N-type, alpha-1 subunit), IPR027359 (Voltage-dependent channel domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00118298
Corresponding_transcriptPPA28744.1
Corresponding_proteinPP63569
Corresponding_oligo_setGPL14372_Probes_24859
GPL14372_Probes_24860
GPL14372_Probes_24861
GPL14372_Probes_24862
GPL14372_Probes_24863
GPL14372_Probes_78034
GPL14372_Probes_78036
GPL14372_Probes_78037
Microarray_resultsGPL14372_Probes_24859
GPL14372_Probes_24860
GPL14372_Probes_24861
GPL14372_Probes_24862
GPL14372_Probes_24863
GPL14372_Probes_78034
GPL14372_Probes_78036
GPL14372_Probes_78037
RNASeq_FPKMWBls:00000322.08543From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-4.5Curator_confirmedWBPerson4055
Methodcurated