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WormBase Tree Display for CDS: PPA28806

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Name Class

PPA28806SMapS_parentSequencePPA_ChrI
StructureSource_exons153
132235
319408
625715
825925
10731148
12551384
15131674
DB_infoDatabasepristionchus.orgcdsgene-UMM-S259-14.54
TREEFAMTREEFAM_IDTF313100
DB_remarkcontains similarity to Pfam domain PF04893 (Yip1 domain); contains similarity to Interpro domain IPR006977 (Yip1 domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00118360
Corresponding_transcriptPPA28806.1
Corresponding_proteinPP63599
Corresponding_oligo_setGPL14372_Probes_63182
GPL14372_Probes_63184
GPL14372_Probes_63185
Matching_cDNAAW052400Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_63182
GPL14372_Probes_63184
GPL14372_Probes_63185
RNASeq_FPKMWBls:000003218.2105From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010159.1539From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S259-14.54Curator_confirmedWBPerson4055
Methodcurated