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WormBase Tree Display for CDS: PPA28840

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Name Class

PPA28840SMapS_parentSequencePPA_ChrI
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S259-16.76
DB_remarkcontains similarity to Pfam domains PF00887 (Acyl CoA binding protein), PF13897 (Golgi-dynamics membrane-trafficking); contains similarity to Interpro domains IPR035984 (Acyl-CoA binding protein superfamily), IPR036598 (GOLD domain superfamily), IPR014352 (FERM/acyl-CoA-binding protein superfamily), IPR009038 (GOLD domain), IPR000582 (Acyl-CoA-binding protein, ACBP)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00118394
Corresponding_transcriptPPA28840.1
Corresponding_proteinPP59074
Corresponding_oligo_setGPL14372_Probes_15593
GPL14372_Probes_63305
GPL14372_Probes_63308
Microarray_resultsGPL14372_Probes_15593
GPL14372_Probes_63305
GPL14372_Probes_63308
RNASeq_FPKMWBls:00000329.77654From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001018.65993From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S259-16.76Curator_confirmedWBPerson4055
Methodcurated