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WormBase Tree Display for CDS: PPA28847

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Name Class

PPA28847SMapS_parentSequencePPA_ChrI
StructureSource_exons (13)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S259-16.89
DB_remarkPPA-FLP-6 protein; contains similarity to Pfam domain PF01581 (FMRFamide related peptide family); contains similarity to Interpro domains IPR002544 (FMRFamide-related peptide-like), IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00118401
Corresponding_transcriptPPA28847.1
Corresponding_proteinPP59032
Corresponding_oligo_setGPL14372_Probes_63327
GPL14372_Probes_63328
GPL14372_Probes_63329
GPL14372_Probes_63330
GPL14372_Probes_63334
GPL14372_Probes_63335
GPL14372_Probes_63336
Matching_cDNACN657091Inferred_automaticallytranscript_builder.pl
FG099959Inferred_automaticallytranscript_builder.pl
FG099325Inferred_automaticallytranscript_builder.pl
FG095952Inferred_automaticallytranscript_builder.pl
FG100382Inferred_automaticallytranscript_builder.pl
FG101086Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_63327
GPL14372_Probes_63328
GPL14372_Probes_63329
GPL14372_Probes_63330
GPL14372_Probes_63334
GPL14372_Probes_63335
GPL14372_Probes_63336
RNASeq_FPKMWBls:000003232.8752From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101116.488From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S259-16.89Curator_confirmedWBPerson4055
Methodcurated