WormBase Tree Display for CDS: PPA28884
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PPA28884 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 56 | |||
146 | 332 | |||||
403 | 492 | |||||
543 | 639 | |||||
731 | 825 | |||||
870 | 1025 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S473-1.0 | ||
DB_remark | contains similarity to Pfam domain PF00650 (CRAL/TRIO domain); contains similarity to Interpro domains IPR001251 (CRAL-TRIO lipid binding domain), IPR036865 (CRAL-TRIO lipid binding domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00118438 | ||||
Corresponding_transcript | PPA28884.1 | |||||
Corresponding_protein | PP68767 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 7.97532 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S473-1.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |