WormBase Tree Display for CDS: PPA28922
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PPA28922 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-3.49 | ||
DB_remark | contains similarity to Pfam domain PF13472 (GDSL-like Lipase/Acylhydrolase family); contains similarity to Interpro domains IPR037460 (Streptomyces scabies esterase-like), IPR013830 (SGNH hydrolase-type esterase domain), IPR036514 (SGNH hydrolase superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00118476 | ||||
Corresponding_transcript | PPA28922.1 | |||||
Corresponding_protein | PP73893 | |||||
Corresponding_oligo_set | GPL14372_Probes_21232 | |||||
GPL14372_Probes_21234 | ||||||
GPL14372_Probes_21235 | ||||||
GPL14372_Probes_21236 | ||||||
Microarray_results | GPL14372_Probes_21232 | |||||
GPL14372_Probes_21234 | ||||||
GPL14372_Probes_21235 | ||||||
GPL14372_Probes_21236 | ||||||
RNASeq_FPKM | WBls:0000032 | 6.07423 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 7.17424 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S259-3.49 | Curator_confirmed | WBPerson4055 | |||
Method | curated |