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WormBase Tree Display for CDS: PPA28993

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Name Class

PPA28993SMapS_parentSequencePPA_ChrI
StructureSource_exons (25)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S278-0.7
DB_remarkcontains similarity to Pfam domains PF00209 (Sodium:neurotransmitter symporter family), PF01414 (Delta serrate ligand); contains similarity to Interpro domains IPR001774 (Delta/Serrate/lag-2 (DSL) protein), IPR000175 (Sodium:neurotransmitter symporter), IPR037272 (Sodium:neurotransmitter symporter superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
End_not_found
VisibleGeneWBGene00118547
Corresponding_transcriptPPA28993.1
Corresponding_proteinPP72351
Corresponding_oligo_setGPL14372_Probes_21331
GPL14372_Probes_21334
Microarray_resultsGPL14372_Probes_21331
GPL14372_Probes_21334
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S278-0.7Curator_confirmedWBPerson4055
Methodcurated