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WormBase Tree Display for CDS: PPA29068

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Name Class

PPA29068SMapS_parentSequencePPA_ChrI
StructureSource_exons (18)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2844-18.47
DB_remarkcontains similarity to Pfam domains PF00053 (Laminin EGF domain), PF16469 (Nematode polyprotein allergen ABA-1); contains similarity to Interpro domains IPR002049 (Laminin-type EGF domain), IPR038289 (DVA-1 superfamily), IPR032487 (Polyprotein allergen, nematode)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00118622
Corresponding_transcriptPPA29068.1
Corresponding_proteinPP73490
Corresponding_oligo_setGPL14372_Probes_88180
GPL14372_Probes_88181
GPL14372_Probes_88182
Microarray_resultsGPL14372_Probes_88180
GPL14372_Probes_88181
GPL14372_Probes_88182
RNASeq_FPKMWBls:000003210.3822From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2844-18.47Curator_confirmedWBPerson4055
Methodcurated