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WormBase Tree Display for CDS: PPA29090

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Name Class

PPA29090SMapS_parentSequencePPA_ChrI
StructureSource_exons163
264389
664737
921990
13321413
15691816
DB_infoDatabasepristionchus.orgcdsgene-UMS-S2844-17.46
DB_remarkcontains similarity to Pfam domain PF00292 ('Paired box' domain); contains similarity to Interpro domains IPR001523 (Paired domain), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR009057 (Homeobox-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00118644
Corresponding_transcriptPPA29090.1
Corresponding_proteinPP49431
Corresponding_oligo_setGPL14372_Probes_31195
GPL14372_Probes_31196
GPL14372_Probes_31197
GPL14372_Probes_31198
Microarray_resultsGPL14372_Probes_31195
GPL14372_Probes_31196
GPL14372_Probes_31197
GPL14372_Probes_31198
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S2844-17.46Curator_confirmedWBPerson4055
Methodcurated