WormBase Tree Display for CDS: PPA29120
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PPA29120 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 83 | |||
331 | 411 | |||||
648 | 731 | |||||
910 | 1009 | |||||
1148 | 1261 | |||||
1364 | 1455 | |||||
1951 | 2029 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-15.96 | ||
DB_remark | contains similarity to Pfam domain PF01549 (ShK domain-like); contains similarity to Interpro domain IPR003582 (ShKT domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00118674 | ||||
Corresponding_transcript | PPA29120.1 | |||||
Corresponding_protein | PP15351 | |||||
Corresponding_oligo_set | GPL14372_Probes_31241 | |||||
Microarray_results | GPL14372_Probes_31241 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-15.96 | Curator_confirmed | WBPerson4055 | |||
Method | curated |