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WormBase Tree Display for CDS: PPA29136

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Name Class

PPA29136SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2844-14.7
DB_remarkPPA-ISTR-1 protein; contains similarity to Pfam domain PF03398 (Regulator of Vps4 activity in the MVB pathway); contains similarity to Interpro domains IPR005061 (Vacuolar protein sorting-associated protein Ist1), IPR042277 (Vacuolar protein sorting-associated protein IST1-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00118690
Corresponding_transcriptPPA29136.1
Corresponding_proteinPP58245
Corresponding_oligo_setGPL14372_Probes_31249
GPL14372_Probes_31250
GPL14372_Probes_88281
Microarray_resultsGPL14372_Probes_31249
GPL14372_Probes_31250
GPL14372_Probes_88281
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2844-14.7Curator_confirmedWBPerson4055
Methodcurated