WormBase Tree Display for CDS: PPA29178
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PPA29178 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 66 | |||
125 | 247 | |||||
311 | 424 | |||||
490 | 672 | |||||
746 | 868 | |||||
913 | 1111 | |||||
1167 | 1297 | |||||
1349 | 1447 | |||||
1533 | 1649 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S278-6.6 | ||
DB_remark | contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00118732 | ||||
Corresponding_transcript | PPA29178.1 | |||||
Corresponding_protein | PP59037 | |||||
Corresponding_oligo_set | GPL14372_Probes_73802 | |||||
GPL14372_Probes_73803 | ||||||
Microarray_results | GPL14372_Probes_73802 | |||||
GPL14372_Probes_73803 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 8.01055 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S278-6.6 | Curator_confirmed | WBPerson4055 | |||
Method | curated |